Commit 1c7b3d07 authored by Jan Keller's avatar Jan Keller
Browse files

Added ressources for Gene Identifier Retriever

parent 7ca256b9
...@@ -24,12 +24,11 @@ ...@@ -24,12 +24,11 @@
resources: resources:
html: ["https://www.ncbi.nlm.nih.gov/protein/GI:%i"] html: ["https://www.ncbi.nlm.nih.gov/protein/GI:%i"]
xml: ["http://www.ncbi.nlm.nih.gov/sviewer/viewer.cgi?tool=portal&db=protein&dopt=xml&sort=&val=%i&retmode=file"] xml: ["http://www.ncbi.nlm.nih.gov/sviewer/viewer.cgi?tool=portal&db=protein&dopt=xml&sort=&val=%i&retmode=file"]
# does not work text: ["https://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?noredirect=1&db=protein&val=%i"]
# check_existence: "http://www.ncbi.nlm.nih.gov/sviewer/viewer.cgi?tool=portal&db=protein&dopt=xml&sort=&val=%i&retmode=file" check_existence: "http://www.ncbi.nlm.nih.gov/sviewer/viewer.cgi?tool=portal&db=protein&dopt=xml&sort=&val=%i&retmode=file"
- name: Conserved domain database retriever:
prefixes: ["CDD"] type: 'internal'
resources: location: 'dbxref.retrieve.gi'
html: ["https://www.ncbi.nlm.nih.gov/Structure/cdd/cddsrv.cgi?uid=%i"]
- name: Uniprot - name: Uniprot
prefixes: ["UniProtKB/TrEMBL", "UniProtKB/Swiss-Prot"] prefixes: ["UniProtKB/TrEMBL", "UniProtKB/Swiss-Prot"]
resources: resources:
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