Add logging of any exception for uniprot retriever

dbxref/retrieve/uniprot.py

@@ -58,9 +58,6 @@ def retrieve(dbxrefs, basic=True, sequence=True, organism=True, annotation=True,
                     output.update(read_annotation(child))
                 if features:
                     output['features'] = read_features(child)
-        except (KeyError, AttributeError) as e:
-            logger.warn('Error in retrieving %s', str(entry))
-            raise
         except RuntimeError as e:
             output['message'] = 'an error occurred'
             try:
@@ -69,6 +66,9 @@ def retrieve(dbxrefs, basic=True, sequence=True, organism=True, annotation=True,
                     output['message'] = 'no results found; probably invalid ID'
             except:
                 pass
+        except:
+            logger.warn('Error in retrieving %s', str(entry))
+            raise
         documents.append(output)
     return documents