Commit 09d53eb3 authored by Lukas Jelonek's avatar Lukas Jelonek
Browse files

Cleanup

parent 196c6240
*.swp
*.pyc
docs/build/
docs/_build/
{
"id" : "gi|15963754|ref|NP_384107.1|",
"computations" : [
{
"tool" : {
"database" : "/vol/biodb/ghostx/uniprot",
"name" : "ghostx",
"version" : "1.3.6"
},
"results" : [
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "UniProtKB/Swiss-Prot:Q5XI95"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "UniProtKB/Swiss-Prot:Q70UN9"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:0008270"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:0004024"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:0004930"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "EC:1.1.1.1"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "EC:2.2.1.1"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "PFAM:PF00002"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "PFAM:PF08240"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "SO:0000022"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "SO:0000714"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:0005737"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:0004022"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:0008270"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Pfam:PF08240"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "SO:0000380"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "SO:0000026"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "SO:0000020"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "UniProtKB/Swiss-Prot:P09370"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "UniProtKB/Swiss-Prot:P22246"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "UniProtKB/Swiss-Prot:P08843"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Taxon:7227"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Taxon:227321"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Taxon:1"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Taxon:1235136485421"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Taxon:g"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "GO:001"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "EC:2.1"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "Pfam:PF040"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "SO:020"
}
},
{
"target" : {
"score" : "42",
"alignment" : "|||||||||||||||||||||||||||",
"dbxref" : "UniProtKB/Swiss-Prot:P09"
}
}
]
}
]
}
{"id": "seq_10.cds_1", "computations": [{"tool": {"database": "/vol/biodb/ghostx/uniprot_sprot", "version": "1.3.6", "name": "ghostx"}, "results": [{"query": {"end": "111", "start": "97"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:Q4KDI2", "start": "81", "evalue": 63.2141, "end": "95", "percent_identity": 66.6667}}, {"query": {"end": "79", "start": "62"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:O64556", "start": "94", "evalue": 140.826, "end": "111", "percent_identity": 55.5556}}, {"query": {"end": "61", "start": "45"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:Q9CKF7", "start": "695", "evalue": 140.826, "end": "711", "percent_identity": 58.8235}}, {"query": {"end": "112", "start": "79"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:Q9UT11", "start": "129", "evalue": 183.925, "end": "161", "percent_identity": 38.2353}}, {"query": {"end": "111", "start": "97"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:Q4ZRC6", "start": "89", "evalue": 240.213, "end": "103", "percent_identity": 60.0}}, {"query": {"end": "101", "start": "79"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:Q11B48", "start": "9", "evalue": 313.728, "end": "31", "percent_identity": 47.8261}}, {"query": {"end": "63", "start": "2"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:B1XSQ1", "start": "102", "evalue": 409.742, "end": "163", "percent_identity": 27.4194}}, {"query": {"end": "79", "start": "62"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:O65924", "start": "95", "evalue": 409.742, "end": "112", "percent_identity": 50.0}}, {"query": {"end": "48", "start": "31"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:B5RBC1", "start": "201", "evalue": 409.742, "end": "218", "percent_identity": 55.5556}}, {"query": {"end": "79", "start": "62"}, "target": {"dbxref": "UniProtKB/Swiss-Prot:O64483", "start": "94", "evalue": 535.14, "end": "111", "percent_identity": 50.0}}]}, {"tool": {"version": "4.1", "mode": "euk", "name": "SignalP"}, "results": [{"signalpeptide": false}]}, {"tool": {"version": "2.0", "name": "TMHMM"}, "results": {"ExpAA": 0.03, "PredHel": 0, "topology": [{"location": "outside", "end": 115, "start": 1}], "First60": 0.0}}]}
\ No newline at end of file
Markdown is supported
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment