Remove redundant sequence id field from results section of targetp in json output.

scripts/convert_targetp.py

@@ -4,9 +4,9 @@ import sys
 import json
 import argparse
 
-parser = argparse.ArgumentParser(description = 'Convert targetp results to json documents')
-parser.add_argument('--result', '-r', required = True, help = 'The targetp results directory')
-parser.add_argument('--output', '-o', required = True, help = 'The converted results json file')
+parser = argparse.ArgumentParser(description='Convert targetp results to json documents')
+parser.add_argument('--result', '-r', required=True, help='The targetp results directory')
+parser.add_argument('--output', '-o', required=True, help='The converted results json file')
 args = parser.parse_args()
 
 loc_dict = {"C": "chloroplast", "M": "mitochondrion", "S": "secretory pathway", "_": "other", "*": "undetermined"}
@@ -16,7 +16,7 @@ documents = {}
 
 with open(filename) as f:
     tool = None
-    field_index = {"Name": None, "cTP": None, "mTP": None, "SP": None, "Loc": None}
+    field_index = {"cTP": None, "mTP": None, "SP": None, "Loc": None}
     is_datasection = False
 
     for line in f:
@@ -29,12 +29,10 @@ with open(filename) as f:
                 results = documents[split[0]]['computations'][0]["results"][0]
                 for field in field_index:
                     if field_index[field] is not None:
-                        if field in ["cTP", "mTP", "SP"]:
-                            results[field.lower()] = float(split[field_index[field]])
-                        elif field == "Loc":
+                        if field == "Loc":
                             results[field.lower()] = loc_dict[split[field_index[field]]]
                         else:
-                            results[field.lower()] = split[field_index[field]]
+                            results[field.lower()] = float(split[field_index[field]])
         else:
             if line.startswith('Name   '):
                 split = line.split()