Commit a574711d authored by Lukas Jelonek's avatar Lukas Jelonek
Browse files

Fix bug: relative execution_directory does not work

parent 436ba8fb
......@@ -53,7 +53,7 @@ def generate_execution(config, args):
execution['fasta'] = os.path.abspath(args.fasta)
execution['output'] = os.path.abspath(args.output)
if args.execution_dir:
execution['directory'] = args.execution_dir
execution['directory'] = os.path.abspath(args.execution_dir)
execution['directory'] = tempfile.mkdtemp()
execution['modules'] = generate_execution_modules_for_profile(config, args.profile)
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