Commit b1443797 authored by Lukas Jelonek's avatar Lukas Jelonek
Browse files

Update container images

parent 0cdb14ce
...@@ -15,7 +15,7 @@ analysis: ...@@ -15,7 +15,7 @@ analysis:
evalue: 1e-10 evalue: 1e-10
use_accession: use_accession:
container: container:
docker: 'biocontainers/blast:v2.2.31_cv2' docker: 'quay.io/biocontainers/blast:2.9.0--pl526he19e7b1_7'
singularity: 'biocontainers/blast:v2.2.31_cv2' singularity: 'biocontainers/blast:v2.2.31_cv2'
# The name of the result to json converter script. Must take one parameter, the # The name of the result to json converter script. Must take one parameter, the
......
...@@ -13,7 +13,7 @@ analysis: ...@@ -13,7 +13,7 @@ analysis:
parameters: parameters:
database: 'ghostx/uniprot_sprot' database: 'ghostx/uniprot_sprot'
container: container:
docker: 'www.computational.bio.uni-giessen.de:5003/psot/ghostx' docker: 'quay.io/biocontainers/ghostx:1.3.7--hfc679d8_1'
# The name of the result to json converter script. Must take one parameter, the # The name of the result to json converter script. Must take one parameter, the
# result file from the analysis_script # result file from the analysis_script
......
...@@ -17,7 +17,7 @@ analysis: ...@@ -17,7 +17,7 @@ analysis:
cluster: cluster:
chunksize: 200 chunksize: 200
container: container:
docker: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1' docker: 'quay.io/biocontainers/hmmer:3.3--he1b5a44_1'
singularity: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1' singularity: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1'
# The name of the result to json converter script. Must take one parameter, the # The name of the result to json converter script. Must take one parameter, the
......
...@@ -17,7 +17,7 @@ analysis: ...@@ -17,7 +17,7 @@ analysis:
cluster: cluster:
chunksize: 200 chunksize: 200
container: container:
docker: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1' docker: 'quay.io/biocontainers/hmmer:3.3--he1b5a44_1'
singularity: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1' singularity: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1'
# The name of the result to json converter script. Must take one parameter, the # The name of the result to json converter script. Must take one parameter, the
......
...@@ -17,7 +17,7 @@ analysis: ...@@ -17,7 +17,7 @@ analysis:
cluster: cluster:
chunksize: 200 chunksize: 200
container: container:
docker: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1' docker: 'quay.io/biocontainers/hmmer:3.3--he1b5a44_1'
singularity: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1' singularity: 'biocontainers/hmmer:v3.1b2dfsg-5-deb_cv1'
# The name of the result to json converter script. Must take one parameter, the # The name of the result to json converter script. Must take one parameter, the
......
...@@ -15,7 +15,7 @@ analysis: ...@@ -15,7 +15,7 @@ analysis:
parameters: parameters:
# run script in a container # run script in a container
container: container:
docker: 'biocontainers/emboss:v6.6.0dfsg-7b1-deb_cv1' docker: 'quay.io/biocontainers/emboss:6.6.0--hf7d6862_3'
singularity: 'biocontainers/emboss:v6.6.0dfsg-7b1-deb_cv1' singularity: 'biocontainers/emboss:v6.6.0dfsg-7b1-deb_cv1'
# The configuration of the script for the json conversion step. # The configuration of the script for the json conversion step.
......
...@@ -15,8 +15,7 @@ analysis: ...@@ -15,8 +15,7 @@ analysis:
parameters: parameters:
# run script in a container # run script in a container
container: container:
docker: 'www.computational.bio.uni-giessen.de:5003/psot/cbs-tools' docker: 'psos-registry2.kenolej.de/psos/signalp:4.1f'
singularity:
# The configuration of the script for the json conversion step. # The configuration of the script for the json conversion step.
converter: converter:
......
...@@ -15,8 +15,7 @@ analysis: ...@@ -15,8 +15,7 @@ analysis:
parameters: parameters:
# run script in a container # run script in a container
container: container:
docker: 'www.computational.bio.uni-giessen.de:5003/psot/cbs-tools' docker: 'psos-registry2.kenolej.de/psos/targetp:1.1b'
singularity:
# The configuration of the script for the json conversion step. # The configuration of the script for the json conversion step.
converter: converter:
......
...@@ -15,8 +15,7 @@ analysis: ...@@ -15,8 +15,7 @@ analysis:
parameters: parameters:
# run script in a container # run script in a container
container: container:
docker: 'www.computational.bio.uni-giessen.de:5003/psot/cbs-tools' docker: 'psos-registry2.kenolej.de/psos/tmhmm:2.0c'
singularity:
# The configuration of the script for the json conversion step. # The configuration of the script for the json conversion step.
converter: converter:
......
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