fixed tmhmm json format

scripts/convert_tmhmm.py

@@ -59,10 +59,12 @@ with open(filename) as f:
 			key = elements[i][:elements[i].rfind('=')]
 			value = elements[i][elements[i].rfind('=')+1:]
 			if key == 'Topology':
-				line_dic[key] = parse_topology(value, elements[i-4][elements[i-4].rfind('=')+1:])
-			else:
-				line_dic[key] = value
-		documents[elements[0]] = line_dic
+				line_dic['topology'] = parse_topology(value, int(elements[i-4][elements[i-4].rfind('=')+1:]))
+			elif key == 'PredHel':
+				line_dic[key] = int(value)
+			elif not key == 'len':
+				line_dic[key] = float(value)
+		documents[elements[0]] = {'computations': [{'tool': {'name': 'TMHMM', 'version': '2.0'}, 'results': line_dic}]}
 
 output_filename = args.output
 with open(output_filename, 'w') as o: