The GenomeVuer can:

• Display a genome as an axis:
  • Axis has ticks depending on the size of the genome
  • Axis is in the vertically centered in the view
  • Axis numbers are even numbers (e.g. 123,000 instead of 123,456)
  • Axis tick numbers have separators (digit grouping)
• Display lanes:
  • Lanes are dotted lines above and below the axis
  • Lanes are in Version 1.0 only for displaying the strand of features
  • Default color: gray. Customizable.
• Display features:
  • Features are on the lanes
  • Features are directed (left or right arrows)
  • Features are colored (filled, bordered) based on
    1. Color properties are given by the user
    2. Feature types are given by the user (feature_to_color map can be customized)
    3. Default Colors (can be customized)
  • Hovering over features let a tooltip appear
  • Tooltip information is customizable
  • Features are clickable. The GenomeVuer knows, which feature was clicked