nextflow.config is now generated with docker and singularity scopes in which...
nextflow.config is now generated with docker and singularity scopes in which the local database directory is mounted/bind in the containers to the /databases directory; config.py now concats the right database directory with the database property in regarding modules
Showing
- psot/config.py 23 additions, 6 deletionspsot/config.py
- psot/default_repo/config.yaml 1 addition, 1 deletionpsot/default_repo/config.yaml
- psot/default_repo/modules/blast_vs_swissprot.yaml 1 addition, 1 deletionpsot/default_repo/modules/blast_vs_swissprot.yaml
- psot/default_repo/modules/ghostx_vs_swissprot.yaml 2 additions, 1 deletionpsot/default_repo/modules/ghostx_vs_swissprot.yaml
- psot/default_repo/modules/hmmer_vs_PFAM-A.yaml 2 additions, 1 deletionpsot/default_repo/modules/hmmer_vs_PFAM-A.yaml
- psot/default_repo/profiles/custom.yaml 0 additions, 1 deletionpsot/default_repo/profiles/custom.yaml
- psot/default_repo/scripts/convert_ghostx.py 0 additions, 4 deletionspsot/default_repo/scripts/convert_ghostx.py
- psot/default_repo/scripts/convert_targetp.py 0 additions, 4 deletionspsot/default_repo/scripts/convert_targetp.py
- psot/main.py 1 addition, 1 deletionpsot/main.py
- psot/nextflow.py 11 additions, 2 deletionspsot/nextflow.py
Loading
Please register or sign in to comment