Commit 7429e324 authored by Lukas Jelonek's avatar Lukas Jelonek
Browse files

Add envelop to hmmer output, replace blast with ghostx in common profile

parent 3d4c8474
......@@ -2,8 +2,7 @@ name: 'complete'
info: 'Profile that uses all available tools'
modules:
signalp:
blastp_swissprot:
alignment:
ghostx_swissprot:
hmmer_pfam_a:
targetp:
organism_group: 'non-plant'
......@@ -53,7 +53,9 @@ with open(filename) as f:
},
'query': {
'start': int(split[17]),
'end': int(split[18])
'end': int(split[18]),
'envelop_start': int(split[19]),
'envelop_end': int(split[20])
}
})
......
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