Commit 4d64a838 authored by Lukas Jelonek's avatar Lukas Jelonek
Browse files

Fix docker image locations and database locations

parent 6d6134b1
......@@ -11,7 +11,7 @@ info: 'blastp analysis against swissprot'
analysis:
script: 'run_blastp.py'
parameters:
database: '/blastp/uniprot_sprot.fasta'
database: '/uniprot/uniprot_sprot.fasta'
evalue: 1e-10
use_accession:
container:
......
......@@ -13,7 +13,7 @@ analysis:
parameters:
database: '/ghostx/uniprot_sprot'
container:
docker: 'ghostx'
docker: 'www.computational.bio.uni-giessen.de:5003/psot/ghostx'
# The name of the result to json converter script. Must take one parameter, the
# result file from the analysis_script
......
......@@ -11,7 +11,7 @@ info: 'hmmscan analysis against PFAM-A'
analysis:
script: 'run_hmmer.py'
parameters:
database: '/hmmer/Pfam-A.hmm'
database: '/pfam/Pfam-A.hmm'
evalue: 1e-10
execution:
cluster:
......
......@@ -15,7 +15,7 @@ analysis:
parameters:
# run script in a container
container:
docker: 'cbs-tools'
docker: 'www.computational.bio.uni-giessen.de:5003/psot/cbs-tools'
singularity:
# The configuration of the script for the json conversion step.
......
......@@ -15,7 +15,7 @@ analysis:
parameters:
# run script in a container
container:
docker: 'cbs-tools'
docker: 'www.computational.bio.uni-giessen.de:5003/psot/cbs-tools'
singularity:
# The configuration of the script for the json conversion step.
......
......@@ -15,7 +15,7 @@ analysis:
parameters:
# run script in a container
container:
docker: 'cbs-tools'
docker: 'www.computational.bio.uni-giessen.de:5003/psot/cbs-tools'
singularity:
# The configuration of the script for the json conversion step.
......
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