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Apr 15, 2024
- Fix wrong import · 0de88e0f
  Lukas Jelonek authored Apr 15, 2024
  
  View commits for tag 0.4.1 0.4.1
  
  0de88e0f
- Fix unknown process warnings · 394696b7
  Lukas Jelonek authored Apr 15, 2024
  
  394696b7
- Add whitespaces around parameter · 203a6bf2
  Lukas Jelonek authored Apr 15, 2024
  
  View commits for tag 0.4.0 0.4.0
  
  203a6bf2
Feb 26, 2024
- Fix sphinx requirement · 6f47357e
  jhahnfel authored Feb 26, 2024
  
  6f47357e
- Add gathering cutoff option · 9e84feff
  jhahnfel authored Feb 26, 2024
  
  9e84feff
- Add sorfdb profiles and configuration · d695403e
  jhahnfel authored Feb 26, 2024
  
  d695403e
Apr 06, 2022
- Setup ci · 9bbc7ad9
  Lukas Jelonek authored Apr 6, 2022
  
  View commits for tag 0.3.2 0.3.2
  
  9bbc7ad9
- Update nextflow in dockerfile · 07b1bca8
  Lukas Jelonek authored Apr 6, 2022
  
  07b1bca8
- Add configuration of k8s default image to repository config · 164a68b0
  Lukas Jelonek authored Apr 6, 2022
  
  164a68b0
Dec 17, 2020
- Fix bug: Indent wrong · 37cf6230
  Lukas Jelonek authored Dec 17, 2020
  
  37cf6230
- Replace dbxref image with psot image · 2d38dfed
  Lukas Jelonek authored Dec 17, 2020
  
  2d38dfed
- Add k8s support · a2ed0e1c
  Lukas Jelonek authored Dec 17, 2020
  
  a2ed0e1c
Nov 12, 2019
- Merge branch 'feature/dbxrefs-list' into 'develop' · 5122e490
  Lukas Jelonek authored Nov 12, 2019
  5122e490
- Replace dbxrefs object with a list of dbxrefs · 95863149
  Lukas Jelonek authored Nov 12, 2019
  
  95863149
Nov 11, 2019
- Fix bug: Feature coordinates are stored as strings · bc32c8d5
  Lukas Jelonek authored Nov 11, 2019
  
  bc32c8d5
Oct 30, 2019
- Add pepstats tool by fabian schnecko · cdae12ed
  Lukas Jelonek authored Oct 30, 2019
  
  cdae12ed
May 21, 2019
- Increase evalue cutoff for bacteria-ecf · 3dbf0882
  Lukas Jelonek authored May 21, 2019
  
  3dbf0882
May 14, 2019
- Add fasta description to json when available · 87ac33e4
  Lukas Jelonek authored May 14, 2019
  
  87ac33e4
- Add bias to hmmer domain target · 3c98f984
  Lukas Jelonek authored May 14, 2019
  
  3c98f984
May 13, 2019
- Add ECF express profile · def36882
  Lukas Jelonek authored May 13, 2019
  
  def36882
- Include evaule in hmmer result. Use name as fallback if no accession is available · a4da29f5
  Lukas Jelonek authored May 13, 2019
  
  a4da29f5
- Include score in ghostx result conversion · 32a4d1b3
  Lukas Jelonek authored May 13, 2019
  
  32a4d1b3
May 08, 2019
- Merge branch 'develop' of git.computational.bio.uni-giessen.de:SOaAS/psot into develop · 254c505d
  Lukas Jelonek authored May 8, 2019
  
  254c505d
- Add max hits argument to run_ghostx.py · 51bf5cfa
  Lukas Jelonek authored May 8, 2019
  
  51bf5cfa
- Fix bug: restore of ids fails if a description is included in the fasta header · 0c7aacb9
  Lukas Jelonek authored May 8, 2019
  
  0c7aacb9
Apr 15, 2019
- Merge branch 'develop' of git.computational.bio.uni-giessen.de:SOaAS/psot into develop · 722c2fe8
  Lukas Jelonek authored Apr 15, 2019
  
  722c2fe8
- Improve targetp json structure by writing out Localization and preserving case... · 52621cec
  Lukas Jelonek authored Apr 15, 2019
  52621cec
Apr 09, 2019
- Add tmhmm to all profiles · d961a607
  Lukas Jelonek authored Apr 9, 2019
  
  d961a607
- Define psot docker image · 825b5d66
  Lukas Jelonek authored Apr 9, 2019
  
  825b5d66
Apr 04, 2019
- Merge branch 'develop' of git.computational.bio.uni-giessen.de:SOaAS/psot into develop · 6910d3fa
  Lukas Jelonek authored Apr 4, 2019
  
  6910d3fa
- Add include_sequence to all profiles · 3d480bcd
  Lukas Jelonek authored Apr 4, 2019
  
  3d480bcd
Mar 28, 2019
- Rename informations to dbxrefs · b43bf23a
  Lukas Jelonek authored Mar 28, 2019
  
  b43bf23a
Mar 20, 2019
- Add profiles for bacteria and eukaryotes · 3ea6f941
  Lukas Jelonek authored Mar 20, 2019
  
  3ea6f941
- Update Authors · 3a464707
  Lukas Jelonek authored Mar 20, 2019
  
  3a464707
Mar 14, 2019
- Merge branch 'develop' of git.computational.bio.uni-giessen.de:SOaAS/psot into develop · be357217
  Lukas Jelonek authored Mar 14, 2019
  
  View commits for tag 0.3.1 0.3.1
  
  be357217
- Add sphinx to requirements · 990700c4
  Lukas Jelonek authored Mar 14, 2019
  
  990700c4
- Add authors file · 3ffab19f
  Lukas Jelonek authored Mar 14, 2019
  
  3ffab19f
- Fix bug: some ghostx installations output the help page on stderr · 9eb7bb7b
  Lukas Jelonek authored Mar 14, 2019
  
  9eb7bb7b
- Fix warning to use yaml loader · fe6f2d62
  Lukas Jelonek authored Mar 14, 2019
  
  fe6f2d62
- Remove database download log rotation from psot · 8e173784
  Lukas Jelonek authored Mar 14, 2019
  
  8e173784