Commits · c5e97033058a1c182890258e33d57c0c6a09608c · SOaAS / psot.repository · GitLab

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Jan 29, 2018
- Fix bug: replace default fasta file with concrete fasta file · c5e97033
  Lukas Jelonek authored Jan 29, 2018
  
  c5e97033
Jan 24, 2018
- Add feature: dbxref lookup (closes #23) · dad7e862
  Lukas Jelonek authored Jan 24, 2018
  dad7e862
- Replace single document handling with dictionary documents handling for dbxref resolver · a0fdafcd
  Lukas Jelonek authored Jan 24, 2018
  
  a0fdafcd
- Add script to resolve dbxrefs for psot results · 3b7d874f
  Lukas Jelonek authored Jan 24, 2018
  
  3b7d874f
- Fix bug: Analysis is executed even if no valid file is given (fixes #39) · 7ecd0ccd
  Lukas Jelonek authored Jan 24, 2018
  7ecd0ccd
- Fix bug: TMHMM json output result key should hold a list (solves #32) · 60e4da60
  Lukas Jelonek authored Jan 24, 2018
  60e4da60
- Add setup script. Move all resources to psot module · d32426b0
  Lukas Jelonek authored Jan 23, 2018
  
  d32426b0
Dec 12, 2017
- added resolve_dbxrefs.py to nextflow.py (not working yet) · 458a3c11
  lmueller authored Dec 12, 2017
  
  458a3c11
Nov 21, 2017
- Replace drmaa with SGE · 301d74c2
  Lukas Jelonek authored Nov 21, 2017
  
  301d74c2
Aug 10, 2017
- Set java drmaa lib before running nextflow · ecf65900
  Lukas Jelonek authored Aug 10, 2017
  
  ecf65900
- Add --use_cluster flag to CLI and pass it to the nextflow executor · 13a05b98
  Lukas Jelonek authored Aug 10, 2017
  
  13a05b98
- Set /vol/sge-tmp as temporary folder · 7aeb1be9
  Lukas Jelonek authored Aug 10, 2017
  
  7aeb1be9
- Add chunkprocessing via drmaa · 6dbf885c
  Lukas Jelonek authored Aug 10, 2017
  
  6dbf885c
Aug 01, 2017
- Extract profiles from config.yaml into own directory · 2e198433
  Lukas Jelonek authored Aug 1, 2017
  
  2e198433
- Restructure project to not mix packages, scripts and executables (Fixes #21) · d8983f62
  Lukas Jelonek authored Aug 1, 2017
  
  d8983f62