Commits · 0f9b5e49d8cc9f35649d29d838c51e9d523e951f · SOaAS / psot.repository · GitLab

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Mar 13, 2019
- Redesign databases. Introduce relative database paths. Docker steps mount the... · cda62f3e
  Lukas Jelonek authored Mar 13, 2019
  cda62f3e
Mar 05, 2019
- Fix docker image locations and database locations · 4d64a838
  Lukas Jelonek authored Mar 5, 2019
  
  4d64a838
Mar 03, 2019
- cleanup · d6e5b700
  Marc authored Mar 3, 2019
  
  d6e5b700
Mar 01, 2019
- default_repo again in project directory; error handling in database script · e332e233
  Marc authored Mar 1, 2019
  
  e332e233
Apr 03, 2018
- Decouple default bcf psot profiles from psot · 43fbb547
  Lukas Jelonek authored Apr 3, 2018
  
  43fbb547
Jan 24, 2018
- Add setup script. Move all resources to psot module · d32426b0
  Lukas Jelonek authored Jan 23, 2018
  
  d32426b0
Nov 27, 2017
- Add targetp module. · 3c3f0eb1
  hmueller authored Nov 27, 2017
  
  3c3f0eb1
Oct 26, 2017
- Update PFAM · d9b2d590
  Lukas Jelonek authored Oct 26, 2017
  
  d9b2d590
Oct 18, 2017
- added tmhmm module · 202ab9c1
  lmueller authored Oct 18, 2017
  
  202ab9c1
Jul 31, 2017
- Add dbxref to ghostx converter. Adapt to blastp and hmmscan json format (Fixes #19) · c48bce70
  Lukas Jelonek authored Jul 31, 2017
  
  c48bce70
- hmmscan converter now uses dbxref instead of accessions (fixes #18) · 152c2c54
  Lukas Jelonek authored Jul 31, 2017
  
  152c2c54
Jul 26, 2017
- Add step that includes the sequence · 5b3d5301
  Lukas Jelonek authored Jul 26, 2017
  
  5b3d5301
- Fix bug: use swissprot accessions instead of full id · 2a3a33d6
  Lukas Jelonek authored Jul 26, 2017
  
  2a3a33d6
- Added configurable dbxref database for blastp converter script · 1a710984
  Lukas Jelonek authored Jul 26, 2017
  
  1a710984
- Modified module manifest structure to allow parameters for converter scripts · 95dd1a8d
  Lukas Jelonek authored Jul 26, 2017
  
  95dd1a8d
May 31, 2017
- Added a module that runs hmmscan vs PFAM-A · 505abbd0
  Lukas Jelonek authored May 31, 2017
  
  505abbd0
Mar 08, 2017
- Added module for ghostx vs swissprot · 100b4c88
  Lukas Jelonek authored Mar 8, 2017
  
  100b4c88
- Renamed signalp runner script · 55ea433f
  Lukas Jelonek authored Mar 8, 2017
  
  55ea433f
- Added a database configuration parameter to the blast wrapper. Renamed the files. · 222f3972
  Lukas Jelonek authored Mar 8, 2017
  
  222f3972
Feb 27, 2017
- Removed relative path in config · 43fe9e23
  Lukas Jelonek authored Feb 27, 2017
  
  43fe9e23
Feb 23, 2017
- Added module manifests · 511becad
  Lukas Jelonek authored Feb 23, 2017
  
  511becad